Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
ALE17772.1Iron-sulfur cluster regulator IscR. (136 aa)    
Predicted Functional Partners:
ALE16460.1
Putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2.
  
  
 0.929
ALE17771.1
Iron-sulfur cluster assembly protein SufB.
     
 0.858
ALE17762.1
Iron binding protein SufA for iron-sulfur cluster assembly; Belongs to the HesB/IscA family.
  
  
 0.830
ALE17059.1
Cysteine desulfurase.
  
  
 0.768
ALE17060.1
Cysteine desulfurase.
  
  
 0.768
ALE15435.1
Nitrite-sensitive transcriptional repressor NsrR.
  
   
 0.687
ALE17767.1
Iron-sulfur cluster assembly protein SufD.
 
   
 0.664
ALE17768.1
Iron-sulfur cluster assembly ATPase protein SufC.
     
 0.612
ALE17765.1
PaaD-like protein (DUF59) involved in Fe-S cluster assembly.
     
 0.608
ALE17770.1
Hypothetical protein.
       0.565
Your Current Organism:
Altererythrobacter epoxidivorans
NCBI taxonomy Id: 361183
Other names: A. epoxidivorans, Altererythrobacter epoxidivorans Kwon et al. 2007, JCM 13815, KCCM 42314, strain JCS350
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