STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDB97541.1Osmoprotectant transport system substrate-binding protein. (299 aa)    
Predicted Functional Partners:
SDB97564.1
Osmoprotectant transport system permease protein.
 
 0.998
SDB97616.1
Osmoprotectant transport system permease protein.
 
 0.998
SDC45014.1
Osmoprotectant transport system permease protein.
 
 0.995
SDC45089.1
Osmoprotectant transport system permease protein.
 
 0.995
SDB97589.1
Osmoprotectant transport system ATP-binding protein.
 0.980
SDC59023.1
Osmoprotectant transport system ATP-binding protein.
 0.935
SDC44981.1
Osmoprotectant transport system ATP-binding protein.
 0.934
SDC58992.1
Osmoprotectant transport system permease protein.
 
 
0.835
SDC35506.1
iron(III) transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
   
  0.561
potA
Spermidine/putrescine transport system ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
   
  0.561
Your Current Organism:
Terribacillus halophilus
NCBI taxonomy Id: 361279
Other names: Bacillus sp. 002-051, DSM 21620, IAM 15310, JCM 21760, KCTC 13937, T. halophilus, Terribacillus halophilus An et al. 2007, strain 002-051
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.