Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDC05921.1 | SDC05955.1 | SAMN05421663_101283 | SAMN05421663_101284 | Signal transduction histidine kinase. | Two-component response regulator, SAPR family, consists of REC, wHTH and BTAD domains. | 0.938 |
SDC05921.1 | SDC05994.1 | SAMN05421663_101283 | SAMN05421663_101285 | Signal transduction histidine kinase. | LPXTG-motif cell wall anchor domain-containing protein. | 0.669 |
SDC05921.1 | SDD39572.1 | SAMN05421663_101283 | SAMN05421663_11047 | Signal transduction histidine kinase. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.730 |
SDC05955.1 | SDC05921.1 | SAMN05421663_101284 | SAMN05421663_101283 | Two-component response regulator, SAPR family, consists of REC, wHTH and BTAD domains. | Signal transduction histidine kinase. | 0.938 |
SDC05955.1 | SDC05994.1 | SAMN05421663_101284 | SAMN05421663_101285 | Two-component response regulator, SAPR family, consists of REC, wHTH and BTAD domains. | LPXTG-motif cell wall anchor domain-containing protein. | 0.622 |
SDC05994.1 | SDC05921.1 | SAMN05421663_101285 | SAMN05421663_101283 | LPXTG-motif cell wall anchor domain-containing protein. | Signal transduction histidine kinase. | 0.669 |
SDC05994.1 | SDC05955.1 | SAMN05421663_101285 | SAMN05421663_101284 | LPXTG-motif cell wall anchor domain-containing protein. | Two-component response regulator, SAPR family, consists of REC, wHTH and BTAD domains. | 0.622 |
SDC05994.1 | SDC06029.1 | SAMN05421663_101285 | SAMN05421663_101286 | LPXTG-motif cell wall anchor domain-containing protein. | Sortase A. | 0.957 |
SDC05994.1 | SDC06065.1 | SAMN05421663_101285 | SAMN05421663_101287 | LPXTG-motif cell wall anchor domain-containing protein. | Hypothetical protein. | 0.512 |
SDC05994.1 | SDC11069.1 | SAMN05421663_101285 | SAMN05421663_101410 | LPXTG-motif cell wall anchor domain-containing protein. | Sortase A. | 0.609 |
SDC05994.1 | SDC79475.1 | SAMN05421663_101285 | SAMN05421663_104130 | LPXTG-motif cell wall anchor domain-containing protein. | Protein phosphatase/bis(5'-nucleosyl)-tetraphosphatase (symmetrical). | 0.515 |
SDC05994.1 | SDD03407.1 | SAMN05421663_101285 | SAMN05421663_10651 | LPXTG-motif cell wall anchor domain-containing protein. | Hypothetical protein. | 0.716 |
SDC05994.1 | SDD06064.1 | SAMN05421663_101285 | SAMN05421663_106130 | LPXTG-motif cell wall anchor domain-containing protein. | Processed acidic surface protein. | 0.523 |
SDC05994.1 | SDD39572.1 | SAMN05421663_101285 | SAMN05421663_11047 | LPXTG-motif cell wall anchor domain-containing protein. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.999 |
SDC05994.1 | SDD62446.1 | SAMN05421663_101285 | SAMN05421663_11550 | LPXTG-motif cell wall anchor domain-containing protein. | Pectate lyase. | 0.646 |
SDC06029.1 | SDC05994.1 | SAMN05421663_101286 | SAMN05421663_101285 | Sortase A. | LPXTG-motif cell wall anchor domain-containing protein. | 0.957 |
SDC06029.1 | SDC06065.1 | SAMN05421663_101286 | SAMN05421663_101287 | Sortase A. | Hypothetical protein. | 0.512 |
SDC06065.1 | SDC05994.1 | SAMN05421663_101287 | SAMN05421663_101285 | Hypothetical protein. | LPXTG-motif cell wall anchor domain-containing protein. | 0.512 |
SDC06065.1 | SDC06029.1 | SAMN05421663_101287 | SAMN05421663_101286 | Hypothetical protein. | Sortase A. | 0.512 |
SDC11069.1 | SDC05994.1 | SAMN05421663_101410 | SAMN05421663_101285 | Sortase A. | LPXTG-motif cell wall anchor domain-containing protein. | 0.609 |
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