Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
SDC07688.1AraC-type DNA-binding protein. (333 aa)    
Predicted Functional Partners:
SDD14660.1
AraC-type DNA-binding protein.
 
  0.857
SDC56846.1
Glutamate synthase (NADPH/NADH) large chain.
    
 0.842
SDC59778.1
AraC-type DNA-binding protein.
  
     0.771
ribB
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate.
     
  0.695
SDD27186.1
AraC-type DNA-binding protein.
 
 
 
0.591
SDD22923.1
AraC-type DNA-binding protein.
  
     0.579
SDC07723.1
Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain.
       0.531
SDC07760.1
6-phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
       0.531
SDD61009.1
AraC-type DNA-binding protein.
  
     0.531
SDD39572.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
     
 0.527
Your Current Organism:
Terribacillus halophilus
NCBI taxonomy Id: 361279
Other names: Bacillus sp. 002-051, DSM 21620, IAM 15310, JCM 21760, KCTC 13937, T. halophilus, Terribacillus halophilus An et al. 2007, strain 002-051
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