STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDC38379.1Oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (340 aa)    
Predicted Functional Partners:
SDC38420.1
Peptide/nickel transport system permease protein.
 
  0.996
SDC38474.1
Peptide/nickel transport system permease protein.
 
  0.996
SDC04208.1
Dipeptide transport system permease protein.
 
 
  0.985
SDD25846.1
Peptide/nickel transport system permease protein.
 
 
  0.983
SDD61712.1
Peptide/nickel transport system permease protein.
 
 
  0.983
SDC43937.1
Peptide/nickel transport system permease protein.
 
 
  0.981
SDC78918.1
Oligopeptide transport system permease protein.
 
 
  0.958
SDC38314.1
Oligopeptide transport system substrate-binding protein.
 
  0.926
SDC89648.1
Putative ABC transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
    
0.904
SDC78885.1
Oligopeptide transport system permease protein.
 
 
  0.866
Your Current Organism:
Terribacillus halophilus
NCBI taxonomy Id: 361279
Other names: Bacillus sp. 002-051, DSM 21620, IAM 15310, JCM 21760, KCTC 13937, T. halophilus, Terribacillus halophilus An et al. 2007, strain 002-051
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.