STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDC42241.1Cys-tRNA(Pro) deacylase, prolyl-tRNA editing enzyme YbaK/EbsC. (162 aa)    
Predicted Functional Partners:
SDC62838.1
Flagellar motor switch protein FliN/FliY.
    
   0.786
SDD07260.1
Inner membrane protein.
 
      0.710
SDC42266.1
AAA domain-containing protein.
       0.572
SDC42303.1
Hypothetical protein.
       0.572
SDC42170.1
Uncharacterized protein, contains Zn-finger domain of CHY type.
       0.532
SDC42204.1
Signal peptidase I; Belongs to the peptidase S26 family.
       0.532
SDC42340.1
Hypothetical protein.
       0.406
SDC42372.1
AraC-type DNA-binding protein.
       0.406
Your Current Organism:
Terribacillus halophilus
NCBI taxonomy Id: 361279
Other names: Bacillus sp. 002-051, DSM 21620, IAM 15310, JCM 21760, KCTC 13937, T. halophilus, Terribacillus halophilus An et al. 2007, strain 002-051
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.