STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDC31321.1Catechol 2,3-dioxygenase. (284 aa)    
Predicted Functional Partners:
SDC17598.1
4-oxalocrotonate tautomerase.
    
 0.713
SDD07224.1
Glyoxylase, beta-lactamase superfamily II.
   
 
  0.696
SDC39404.1
Glyoxalase family protein.
  
 
 0.659
SDB99539.1
Glyoxalase family protein.
  
 
 0.638
SDC94382.1
Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase).
 
    0.605
SDD51862.1
Glyoxalase family protein.
  
 
  0.599
SDC31290.1
Hypothetical protein.
       0.548
SDC31353.1
Nucleoside transport protein; Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family.
       0.515
pyrK
Dihydroorotate dehydrogenase electron transfer subunit; Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+).
    
  0.465
SDC30327.1
Phospholipase/carboxylesterase.
 
    0.464
Your Current Organism:
Terribacillus halophilus
NCBI taxonomy Id: 361279
Other names: Bacillus sp. 002-051, DSM 21620, IAM 15310, JCM 21760, KCTC 13937, T. halophilus, Terribacillus halophilus An et al. 2007, strain 002-051
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