STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDC49459.1CsbD-like; Belongs to the UPF0337 (CsbD) family. (63 aa)    
Predicted Functional Partners:
SDD05633.1
General stress protein 26.
  
    0.760
SDB99139.1
Uncharacterized protein YdaT.
   
    0.717
SDC44652.1
Uncharacterized protein YvpB.
   
    0.619
SDD69871.1
Gas vesicle protein.
   
    0.607
SDC78051.1
Hypothetical protein.
   
    0.573
SDC95314.1
Hypothetical protein.
   
    0.573
SDD57632.1
Dihydrofolate reductase.
   
    0.573
lacD
Tagatose 1,6-diphosphate aldolase; Belongs to the aldolase LacD family.
   
    0.554
SDC42572.1
Hypothetical protein.
   
  
 0.552
SDC49500.1
Lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
    0.521
Your Current Organism:
Terribacillus halophilus
NCBI taxonomy Id: 361279
Other names: Bacillus sp. 002-051, DSM 21620, IAM 15310, JCM 21760, KCTC 13937, T. halophilus, Terribacillus halophilus An et al. 2007, strain 002-051
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.