STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDC61225.1Simple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. (347 aa)    
Predicted Functional Partners:
SDC61190.1
Simple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
0.998
SDC61257.1
Simple sugar transport system ATP-binding protein.
 
 0.998
SDC61297.1
Basic membrane protein A.
 
 
 0.961
SDC21442.1
Basic membrane protein A.
 
 
 0.928
SDC61075.1
3-oxoacyl-[acyl-carrier protein] reductase.
       0.511
SDC61122.1
Predicted Zn-dependent peptidase.
       0.511
SDC61156.1
Predicted Zn-dependent peptidase.
       0.511
deoB
Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family.
 
    0.502
Your Current Organism:
Terribacillus halophilus
NCBI taxonomy Id: 361279
Other names: Bacillus sp. 002-051, DSM 21620, IAM 15310, JCM 21760, KCTC 13937, T. halophilus, Terribacillus halophilus An et al. 2007, strain 002-051
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.