STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDC70146.1Serine/threonine protein kinase. (262 aa)    
Predicted Functional Partners:
SDC64854.1
Protein phosphatase.
 
 0.883
SDD25161.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
  
 
 0.842
ribB
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate.
  
 
 0.773
SDD39572.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 
  0.769
SDC78324.1
Diguanylate cyclase (GGDEF) domain-containing protein.
  
  
 0.732
SDD15441.1
Diguanylate cyclase (GGDEF) domain-containing protein.
     
 0.710
SDD38582.1
Diguanylate cyclase (GGDEF) domain-containing protein.
     
 0.710
SDC06633.1
Anti-sigma regulatory factor (Ser/Thr protein kinase).
    
   0.565
SDD09564.1
Serine/threonine-protein kinase RsbT.
    
   0.565
SDC45295.1
Hypothetical protein.
  
 0.534
Your Current Organism:
Terribacillus halophilus
NCBI taxonomy Id: 361279
Other names: Bacillus sp. 002-051, DSM 21620, IAM 15310, JCM 21760, KCTC 13937, T. halophilus, Terribacillus halophilus An et al. 2007, strain 002-051
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