STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDC94619.12-keto-4-pentenoate hydratase. (273 aa)    
Predicted Functional Partners:
leuA
2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily.
  
 
 0.801
SDB98726.1
Acylpyruvate hydrolase.
  
 
 0.762
SDD14828.1
RraA famliy.
    
 0.743
SDC17598.1
4-oxalocrotonate tautomerase.
    
 0.736
SDB99539.1
Glyoxalase family protein.
     
 0.480
SDD35187.1
N-methylhydantoinase A.
  
     0.460
SDC94579.1
Hypothetical protein.
       0.459
SDC58839.1
NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family.
 
   
 0.446
SDB97662.1
Hypothetical protein.
  
     0.437
SDC39807.1
Acyl dehydratase.
  
     0.423
Your Current Organism:
Terribacillus halophilus
NCBI taxonomy Id: 361279
Other names: Bacillus sp. 002-051, DSM 21620, IAM 15310, JCM 21760, KCTC 13937, T. halophilus, Terribacillus halophilus An et al. 2007, strain 002-051
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