STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDC95314.1Hypothetical protein. (212 aa)    
Predicted Functional Partners:
SDC95344.1
DNA-binding transcriptional regulator, IscR family.
 
  
 0.802
SDC78051.1
Hypothetical protein.
  
    0.660
SDC63262.1
Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
    
   0.629
SDD57632.1
Dihydrofolate reductase.
  
    0.582
lacD
Tagatose 1,6-diphosphate aldolase; Belongs to the aldolase LacD family.
   
    0.573
SDC49459.1
CsbD-like; Belongs to the UPF0337 (CsbD) family.
   
    0.573
SDD05633.1
General stress protein 26.
  
    0.573
SDB99139.1
Uncharacterized protein YdaT.
   
    0.566
SDC69426.1
Proton-dependent oligopeptide transporter, POT family.
   
    0.564
SDC95718.1
Hypothetical protein.
   
    0.550
Your Current Organism:
Terribacillus halophilus
NCBI taxonomy Id: 361279
Other names: Bacillus sp. 002-051, DSM 21620, IAM 15310, JCM 21760, KCTC 13937, T. halophilus, Terribacillus halophilus An et al. 2007, strain 002-051
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