Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDC79850.1 | SDC95749.1 | SAMN05421663_104141 | SAMN05421663_105219 | Enterochelin esterase. | Predicted N-acyltransferase, GNAT family. | 0.514 |
SDC95718.1 | SDC95749.1 | SAMN05421663_105218 | SAMN05421663_105219 | Hypothetical protein. | Predicted N-acyltransferase, GNAT family. | 0.447 |
SDC95749.1 | SDC79850.1 | SAMN05421663_105219 | SAMN05421663_104141 | Predicted N-acyltransferase, GNAT family. | Enterochelin esterase. | 0.514 |
SDC95749.1 | SDC95718.1 | SAMN05421663_105219 | SAMN05421663_105218 | Predicted N-acyltransferase, GNAT family. | Hypothetical protein. | 0.447 |
SDC95749.1 | SDC95805.1 | SAMN05421663_105219 | SAMN05421663_105221 | Predicted N-acyltransferase, GNAT family. | Predicted oxidoreductase. | 0.438 |
SDC95749.1 | rocD | SAMN05421663_105219 | SAMN05421663_105220 | Predicted N-acyltransferase, GNAT family. | Ornithine--oxo-acid transaminase; Catalyzes the interconversion of ornithine to glutamate semialdehyde. | 0.476 |
SDC95749.1 | rpoC | SAMN05421663_105219 | SAMN05421663_11469 | Predicted N-acyltransferase, GNAT family. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.489 |
SDC95805.1 | SDC95749.1 | SAMN05421663_105221 | SAMN05421663_105219 | Predicted oxidoreductase. | Predicted N-acyltransferase, GNAT family. | 0.438 |
SDC95805.1 | rocD | SAMN05421663_105221 | SAMN05421663_105220 | Predicted oxidoreductase. | Ornithine--oxo-acid transaminase; Catalyzes the interconversion of ornithine to glutamate semialdehyde. | 0.701 |
rocD | SDC95749.1 | SAMN05421663_105220 | SAMN05421663_105219 | Ornithine--oxo-acid transaminase; Catalyzes the interconversion of ornithine to glutamate semialdehyde. | Predicted N-acyltransferase, GNAT family. | 0.476 |
rocD | SDC95805.1 | SAMN05421663_105220 | SAMN05421663_105221 | Ornithine--oxo-acid transaminase; Catalyzes the interconversion of ornithine to glutamate semialdehyde. | Predicted oxidoreductase. | 0.701 |
rpoC | SDC95749.1 | SAMN05421663_11469 | SAMN05421663_105219 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Predicted N-acyltransferase, GNAT family. | 0.489 |