Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDC56811.1 | SDC56846.1 | SAMN05421663_1032 | SAMN05421663_1033 | Glutamate synthase (NADPH/NADH) small chain. | Glutamate synthase (NADPH/NADH) large chain. | 0.999 |
SDC56811.1 | SDC68246.1 | SAMN05421663_1032 | SAMN05421663_103338 | Glutamate synthase (NADPH/NADH) small chain. | Dihydrolipoamide dehydrogenase. | 0.571 |
SDC56811.1 | SDD05667.1 | SAMN05421663_1032 | SAMN05421663_106117 | Glutamate synthase (NADPH/NADH) small chain. | N-Dimethylarginine dimethylaminohydrolase. | 0.659 |
SDC56811.1 | SDD23735.1 | SAMN05421663_1032 | SAMN05421663_10832 | Glutamate synthase (NADPH/NADH) small chain. | 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.578 |
SDC56811.1 | SDD51463.1 | SAMN05421663_1032 | SAMN05421663_11252 | Glutamate synthase (NADPH/NADH) small chain. | 8-amino-7-oxononanoate synthase. | 0.685 |
SDC56811.1 | argG | SAMN05421663_1032 | SAMN05421663_106176 | Glutamate synthase (NADPH/NADH) small chain. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.435 |
SDC56846.1 | SDC56811.1 | SAMN05421663_1033 | SAMN05421663_1032 | Glutamate synthase (NADPH/NADH) large chain. | Glutamate synthase (NADPH/NADH) small chain. | 0.999 |
SDC56846.1 | SDC68246.1 | SAMN05421663_1033 | SAMN05421663_103338 | Glutamate synthase (NADPH/NADH) large chain. | Dihydrolipoamide dehydrogenase. | 0.876 |
SDC56846.1 | SDC92438.1 | SAMN05421663_1033 | SAMN05421663_105105 | Glutamate synthase (NADPH/NADH) large chain. | Glutamate or tyrosine decarboxylase. | 0.872 |
SDC56846.1 | SDD05667.1 | SAMN05421663_1033 | SAMN05421663_106117 | Glutamate synthase (NADPH/NADH) large chain. | N-Dimethylarginine dimethylaminohydrolase. | 0.786 |
SDC56846.1 | SDD07591.1 | SAMN05421663_1033 | SAMN05421663_106180 | Glutamate synthase (NADPH/NADH) large chain. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.516 |
SDC56846.1 | SDD23735.1 | SAMN05421663_1033 | SAMN05421663_10832 | Glutamate synthase (NADPH/NADH) large chain. | 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.867 |
SDC56846.1 | SDD51463.1 | SAMN05421663_1033 | SAMN05421663_11252 | Glutamate synthase (NADPH/NADH) large chain. | 8-amino-7-oxononanoate synthase. | 0.893 |
SDC56846.1 | argG | SAMN05421663_1033 | SAMN05421663_106176 | Glutamate synthase (NADPH/NADH) large chain. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.892 |
SDC68246.1 | SDC56811.1 | SAMN05421663_103338 | SAMN05421663_1032 | Dihydrolipoamide dehydrogenase. | Glutamate synthase (NADPH/NADH) small chain. | 0.571 |
SDC68246.1 | SDC56846.1 | SAMN05421663_103338 | SAMN05421663_1033 | Dihydrolipoamide dehydrogenase. | Glutamate synthase (NADPH/NADH) large chain. | 0.876 |
SDC68246.1 | SDC75306.1 | SAMN05421663_103338 | SAMN05421663_10410 | Dihydrolipoamide dehydrogenase. | L-threonine aldolase. | 0.532 |
SDC68246.1 | SDC92438.1 | SAMN05421663_103338 | SAMN05421663_105105 | Dihydrolipoamide dehydrogenase. | Glutamate or tyrosine decarboxylase. | 0.508 |
SDC68246.1 | SDD05667.1 | SAMN05421663_103338 | SAMN05421663_106117 | Dihydrolipoamide dehydrogenase. | N-Dimethylarginine dimethylaminohydrolase. | 0.551 |
SDC68246.1 | SDD23735.1 | SAMN05421663_103338 | SAMN05421663_10832 | Dihydrolipoamide dehydrogenase. | 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.547 |
page 1 of 4