STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD09746.1SprT-like protein. (158 aa)    
Predicted Functional Partners:
SDD47371.1
Heptaprenyl diphosphate synthase.
  
     0.652
SDC77347.1
ABC-2 type transport system permease protein.
  
     0.627
SDD57052.1
Spore germination protein D.
  
     0.609
SDC67341.1
Transcription factor, RsfA family.
  
     0.605
rpoE
DNA-directed RNA polymerase subunit delta; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; Belongs to the RpoE family.
  
     0.601
SDD17224.1
Prespore-specific regulator.
  
     0.601
SDC67431.1
PDZ domain-containing protein.
 
     0.592
SDD50039.1
Uncharacterized SPBc2 prophage-derived protein YoqJ; Belongs to the UPF0398 family.
  
     0.579
SDD66408.1
Regulator of replication initiation timing; Involved in initiation control of chromosome replication. Belongs to the YabA family.
  
     0.538
SDD09724.1
Uncharacterized protein.
  
  
 0.527
Your Current Organism:
Terribacillus halophilus
NCBI taxonomy Id: 361279
Other names: Bacillus sp. 002-051, DSM 21620, IAM 15310, JCM 21760, KCTC 13937, T. halophilus, Terribacillus halophilus An et al. 2007, strain 002-051
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.