STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD15189.1Two-component system, NarL family, response regulator LiaR. (210 aa)    
Predicted Functional Partners:
SDD15161.1
Two-component system, NarL family, sensor histidine kinase LiaS.
  0.972
SDC01309.1
Two-component system, NarL family, sensor histidine kinase LiaS.
  0.905
SDC69491.1
Two-component system, NarL family, sensor histidine kinase DesK.
 
 0.905
SDD25161.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
  
 0.897
SDC11352.1
Two-component system, NarL family, sensor histidine kinase DegS; Member of the two-component regulatory system DegS/DegU, which plays an important role in the transition growth phase.
  0.896
SDD24400.1
Signal transduction histidine kinase.
 
 0.882
SDD25128.1
EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant).
  
 0.822
SDD15441.1
Diguanylate cyclase (GGDEF) domain-containing protein.
  
 0.792
SDD38582.1
Diguanylate cyclase (GGDEF) domain-containing protein.
  
 0.792
SDD15125.1
Lia operon protein LiaF.
 
    0.772
Your Current Organism:
Terribacillus halophilus
NCBI taxonomy Id: 361279
Other names: Bacillus sp. 002-051, DSM 21620, IAM 15310, JCM 21760, KCTC 13937, T. halophilus, Terribacillus halophilus An et al. 2007, strain 002-051
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.