STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD15502.1Prepilin-type N-terminal cleavage/methylation domain-containing protein. (461 aa)    
Predicted Functional Partners:
SDD15604.1
Type IV pilus assembly protein PilB.
  
 0.937
SDD15688.1
Type IV pilus assembly protein PilA.
  
 
 0.911
SDD53854.1
Competence protein ComGA.
  
 0.904
SDD53803.1
Competence protein ComGC; Required for transformation and DNA binding.
  
 
 0.888
SDD15659.1
Type IV pilus assembly protein PilC.
  
  
 0.860
SDD53713.1
Competence protein ComGF.
  
  
 0.821
SDD53834.1
Competence protein ComGB.
  
  
 0.790
SDC11472.1
Competence protein ComFA.
   
  
 0.781
SDD53777.1
Competence protein ComGD.
  
 
 0.741
SDD15719.1
Leader peptidase (prepilin peptidase) / N-methyltransferase.
  
  
 0.720
Your Current Organism:
Terribacillus halophilus
NCBI taxonomy Id: 361279
Other names: Bacillus sp. 002-051, DSM 21620, IAM 15310, JCM 21760, KCTC 13937, T. halophilus, Terribacillus halophilus An et al. 2007, strain 002-051
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.