STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD26041.1O-acetylhomoserine (thiol)-lyase. (431 aa)    
Predicted Functional Partners:
metXA
Homoserine O-acetyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine.
 
 0.951
SDC58959.1
Predicted CoA-binding protein.
   
  0.921
SDC19168.1
Homoserine dehydrogenase.
 
 
 0.872
SDD61471.1
Methionine synthase II (cobalamin-independent).
  
 
 0.856
SDD25998.1
Hypothetical protein.
    
  0.777
SDD25954.1
Peptide/nickel transport system substrate-binding protein.
  
    0.775
SDD25886.1
Glutathione transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
  
    0.770
SDD25921.1
FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family.
  
    0.769
SDC70034.1
Threonine dehydratase.
   
 
  0.759
SDD26079.1
Hypothetical protein.
  
    0.745
Your Current Organism:
Terribacillus halophilus
NCBI taxonomy Id: 361279
Other names: Bacillus sp. 002-051, DSM 21620, IAM 15310, JCM 21760, KCTC 13937, T. halophilus, Terribacillus halophilus An et al. 2007, strain 002-051
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