Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDC19168.1 | SDC58959.1 | SAMN05421663_101619 | SAMN05421663_10367 | Homoserine dehydrogenase. | Predicted CoA-binding protein. | 0.733 |
SDC19168.1 | SDC70034.1 | SAMN05421663_101619 | SAMN05421663_103392 | Homoserine dehydrogenase. | Threonine dehydratase. | 0.973 |
SDC19168.1 | SDD26041.1 | SAMN05421663_101619 | SAMN05421663_108110 | Homoserine dehydrogenase. | O-acetylhomoserine (thiol)-lyase. | 0.872 |
SDC19168.1 | SDD61471.1 | SAMN05421663_101619 | SAMN05421663_11520 | Homoserine dehydrogenase. | Methionine synthase II (cobalamin-independent). | 0.898 |
SDC19168.1 | metXA | SAMN05421663_101619 | SAMN05421663_101513 | Homoserine dehydrogenase. | Homoserine O-acetyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine. | 0.933 |
SDC58959.1 | SDC19168.1 | SAMN05421663_10367 | SAMN05421663_101619 | Predicted CoA-binding protein. | Homoserine dehydrogenase. | 0.733 |
SDC58959.1 | SDC70034.1 | SAMN05421663_10367 | SAMN05421663_103392 | Predicted CoA-binding protein. | Threonine dehydratase. | 0.764 |
SDC58959.1 | SDD26041.1 | SAMN05421663_10367 | SAMN05421663_108110 | Predicted CoA-binding protein. | O-acetylhomoserine (thiol)-lyase. | 0.921 |
SDC58959.1 | metXA | SAMN05421663_10367 | SAMN05421663_101513 | Predicted CoA-binding protein. | Homoserine O-acetyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine. | 0.521 |
SDC70034.1 | SDC19168.1 | SAMN05421663_103392 | SAMN05421663_101619 | Threonine dehydratase. | Homoserine dehydrogenase. | 0.973 |
SDC70034.1 | SDC58959.1 | SAMN05421663_103392 | SAMN05421663_10367 | Threonine dehydratase. | Predicted CoA-binding protein. | 0.764 |
SDC70034.1 | SDD26041.1 | SAMN05421663_103392 | SAMN05421663_108110 | Threonine dehydratase. | O-acetylhomoserine (thiol)-lyase. | 0.759 |
SDC70034.1 | SDD61471.1 | SAMN05421663_103392 | SAMN05421663_11520 | Threonine dehydratase. | Methionine synthase II (cobalamin-independent). | 0.816 |
SDC70034.1 | metXA | SAMN05421663_103392 | SAMN05421663_101513 | Threonine dehydratase. | Homoserine O-acetyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine. | 0.805 |
SDD25886.1 | SDD25921.1 | SAMN05421663_108106 | SAMN05421663_108107 | Glutathione transport system ATP-binding protein; Belongs to the ABC transporter superfamily. | FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family. | 0.773 |
SDD25886.1 | SDD25954.1 | SAMN05421663_108106 | SAMN05421663_108108 | Glutathione transport system ATP-binding protein; Belongs to the ABC transporter superfamily. | Peptide/nickel transport system substrate-binding protein. | 0.920 |
SDD25886.1 | SDD25998.1 | SAMN05421663_108106 | SAMN05421663_108109 | Glutathione transport system ATP-binding protein; Belongs to the ABC transporter superfamily. | Hypothetical protein. | 0.770 |
SDD25886.1 | SDD26041.1 | SAMN05421663_108106 | SAMN05421663_108110 | Glutathione transport system ATP-binding protein; Belongs to the ABC transporter superfamily. | O-acetylhomoserine (thiol)-lyase. | 0.770 |
SDD25886.1 | SDD26079.1 | SAMN05421663_108106 | SAMN05421663_108111 | Glutathione transport system ATP-binding protein; Belongs to the ABC transporter superfamily. | Hypothetical protein. | 0.731 |
SDD25921.1 | SDD25886.1 | SAMN05421663_108107 | SAMN05421663_108106 | FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family. | Glutathione transport system ATP-binding protein; Belongs to the ABC transporter superfamily. | 0.773 |
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