STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD33605.1DNA polymerase. (210 aa)    
Predicted Functional Partners:
SDD33634.1
Hypothetical protein.
       0.773
SDD33573.1
Hypothetical protein.
       0.764
ung
uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.
     
 0.701
SDC47721.1
Single-strand DNA-binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.
   
   0.684
SDC63262.1
Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
    
   0.629
SDD33677.1
Uncharacterized conserved protein, DUF2164 family.
 
     0.611
SDC89497.1
tRNA threonylcarbamoyladenosine biosynthesis protein TsaB.
  
    0.557
SDD62059.1
Nitronate monooxygenase.
    
  0.495
ndk
Nucleoside-diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
    
  0.457
SDD18535.1
Competence protein ComEC.
      
 0.414
Your Current Organism:
Terribacillus halophilus
NCBI taxonomy Id: 361279
Other names: Bacillus sp. 002-051, DSM 21620, IAM 15310, JCM 21760, KCTC 13937, T. halophilus, Terribacillus halophilus An et al. 2007, strain 002-051
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.