STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD38139.1Transcriptional antiterminator. (694 aa)    
Predicted Functional Partners:
SDD38211.1
PTS system, galactitol-specific IIB component.
 
 
 0.985
SDD38173.1
PTS system, galactitol-specific IIA component.
 
 
  0.946
SDC94773.1
PTS system, ascorbate-specific IIC component.
 
 
 0.943
SDD38250.1
PTS system, galactitol-specific IIC component.
 
 
 0.928
SDB98542.1
PTS system, mannitol-specific IIC component.
 
 
 0.924
SDD31419.1
PTS system, galactitol-specific IIB component.
 
 
 0.924
SDC94745.1
PTS system, ascorbate-specific IIB component.
 
 
 0.910
SDC15928.1
PTS system, fructose-specific IIC component.
  
 
 0.908
SDC34213.1
PTS system, fructose-specific, IIB component/PTS system, fructose subfamily, IIA component/PTS system, fructose subfamily, IIC component.
  
 
 0.908
SDB98484.1
PTS system, mannitol-specific IIA component.
 
 
0.879
Your Current Organism:
Terribacillus halophilus
NCBI taxonomy Id: 361279
Other names: Bacillus sp. 002-051, DSM 21620, IAM 15310, JCM 21760, KCTC 13937, T. halophilus, Terribacillus halophilus An et al. 2007, strain 002-051
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.