STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD53915.1Protein YqhG of unknown function. (279 aa)    
Predicted Functional Partners:
SDD53947.1
Helicase conserved C-terminal domain-containing protein.
  
 0.925
SDD17224.1
Prespore-specific regulator.
  
     0.775
SDC67341.1
Transcription factor, RsfA family.
  
     0.774
SDD14107.1
Stage VI sporulation protein D.
  
     0.774
SDD54570.1
Stage III sporulation protein AH.
  
     0.774
SDD57052.1
Spore germination protein D.
  
     0.774
SDD09388.1
Outer membrane lipoprotein-sorting protein.
  
     0.773
SDC60620.1
Spore coat protein E.
  
     0.772
SDC78742.1
Protein of unknown function.
  
     0.769
SDD67592.1
Spore cortex biosynthesis protein YabQ.
  
     0.768
Your Current Organism:
Terribacillus halophilus
NCBI taxonomy Id: 361279
Other names: Bacillus sp. 002-051, DSM 21620, IAM 15310, JCM 21760, KCTC 13937, T. halophilus, Terribacillus halophilus An et al. 2007, strain 002-051
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.