Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDC08856.1 | SDD55213.1 | SAMN05421663_101360 | SAMN05421663_11365 | Gluconokinase; Belongs to the FGGY kinase family. | Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. | 0.766 |
SDC08856.1 | SDD55281.1 | SAMN05421663_101360 | SAMN05421663_11367 | Gluconokinase; Belongs to the FGGY kinase family. | L-rhamnose mutarotase; Involved in the anomeric conversion of L-rhamnose. | 0.711 |
SDC08856.1 | rhaA | SAMN05421663_101360 | SAMN05421663_11368 | Gluconokinase; Belongs to the FGGY kinase family. | L-rhamnose isomerase; Belongs to the rhamnose isomerase family. | 0.777 |
SDD13489.1 | SDD55213.1 | SAMN05421663_10727 | SAMN05421663_11365 | L-fuconolactonase. | Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. | 0.622 |
SDD13489.1 | SDD55281.1 | SAMN05421663_10727 | SAMN05421663_11367 | L-fuconolactonase. | L-rhamnose mutarotase; Involved in the anomeric conversion of L-rhamnose. | 0.657 |
SDD13489.1 | SDD55627.1 | SAMN05421663_10727 | SAMN05421663_11377 | L-fuconolactonase. | alpha-L-rhamnosidase. | 0.593 |
SDD55182.1 | SDD55213.1 | SAMN05421663_11364 | SAMN05421663_11365 | MFS transporter, SP family, inositol transporter. | Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. | 0.584 |
SDD55182.1 | SDD55243.1 | SAMN05421663_11364 | SAMN05421663_11366 | MFS transporter, SP family, inositol transporter. | Rhamnulokinase. | 0.797 |
SDD55182.1 | SDD55281.1 | SAMN05421663_11364 | SAMN05421663_11367 | MFS transporter, SP family, inositol transporter. | L-rhamnose mutarotase; Involved in the anomeric conversion of L-rhamnose. | 0.868 |
SDD55182.1 | rhaA | SAMN05421663_11364 | SAMN05421663_11368 | MFS transporter, SP family, inositol transporter. | L-rhamnose isomerase; Belongs to the rhamnose isomerase family. | 0.804 |
SDD55213.1 | SDC08856.1 | SAMN05421663_11365 | SAMN05421663_101360 | Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. | Gluconokinase; Belongs to the FGGY kinase family. | 0.766 |
SDD55213.1 | SDD13489.1 | SAMN05421663_11365 | SAMN05421663_10727 | Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. | L-fuconolactonase. | 0.622 |
SDD55213.1 | SDD55182.1 | SAMN05421663_11365 | SAMN05421663_11364 | Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. | MFS transporter, SP family, inositol transporter. | 0.584 |
SDD55213.1 | SDD55243.1 | SAMN05421663_11365 | SAMN05421663_11366 | Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. | Rhamnulokinase. | 0.960 |
SDD55213.1 | SDD55281.1 | SAMN05421663_11365 | SAMN05421663_11367 | Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. | L-rhamnose mutarotase; Involved in the anomeric conversion of L-rhamnose. | 0.938 |
SDD55213.1 | SDD55390.1 | SAMN05421663_11365 | SAMN05421663_11370 | Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. | Rhamnose transport system substrate-binding protein/rhamnose transport system permease protein. | 0.786 |
SDD55213.1 | SDD55433.1 | SAMN05421663_11365 | SAMN05421663_11371 | Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. | Rhamnose transport system substrate-binding protein. | 0.813 |
SDD55213.1 | SDD55627.1 | SAMN05421663_11365 | SAMN05421663_11377 | Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. | alpha-L-rhamnosidase. | 0.754 |
SDD55213.1 | rhaA | SAMN05421663_11365 | SAMN05421663_11368 | Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. | L-rhamnose isomerase; Belongs to the rhamnose isomerase family. | 0.863 |
SDD55213.1 | xylB | SAMN05421663_11365 | SAMN05421663_10314 | Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. | Xylulokinase. | 0.766 |
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