STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD62631.1Predicted arabinose efflux permease, MFS family. (397 aa)    
Predicted Functional Partners:
SDD62597.1
XTP/dITP diphosphohydrolase.
 
     0.810
SDD62560.1
DNA-binding transcriptional regulator SgrR of sgrS sRNA, contains a MarR-type HTH domain and a solute-binding domain.
 
     0.786
SDC84337.1
Type VII secretion protein EsaA, N-terminal domain-containing protein.
  
     0.698
SDC84435.1
Type VII secretion protein EssB.
  
     0.671
SDD61307.1
Methyltransferase, TIGR00027 family; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity.
  
     0.650
SDD31984.1
Hypothetical protein.
  
    0.616
SDC19168.1
Homoserine dehydrogenase.
   
  0.603
SDC05490.1
Bifunctional autolysin.
  
     0.601
SDC84304.1
WXG100 family type VII secretion target; Belongs to the WXG100 family.
  
     0.591
SDC84472.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
  
     0.591
Your Current Organism:
Terribacillus halophilus
NCBI taxonomy Id: 361279
Other names: Bacillus sp. 002-051, DSM 21620, IAM 15310, JCM 21760, KCTC 13937, T. halophilus, Terribacillus halophilus An et al. 2007, strain 002-051
Server load: low (12%) [HD]