STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T1GFA6_MEGSCHECT domain-containing protein. (553 aa)    
Predicted Functional Partners:
T1GW12_MEGSC
HECT domain-containing protein.
 
     0.926
T1GN19_MEGSC
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.847
T1GSX6_MEGSC
Uncharacterized protein.
    
 0.803
T1GMN4_MEGSC
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.758
T1GBF2_MEGSC
Ubiquitin-like domain-containing protein.
   
 0.756
T1H705_MEGSC
Uncharacterized protein.
   
 0.756
T1GD72_MEGSC
Uncharacterized protein.
    
 0.739
T1GDY2_MEGSC
F-box domain-containing protein.
    
 0.737
T1GM62_MEGSC
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.737
T1H6S3_MEGSC
Uncharacterized protein.
    
 0.734
Your Current Organism:
Megaselia scalaris
NCBI taxonomy Id: 36166
Other names: M. scalaris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.