STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T1GT27_MEGSCRibosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (446 aa)    
Predicted Functional Partners:
T1GI53_MEGSC
Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family.
   
 
 0.996
T1H5N5_MEGSC
Uncharacterized protein.
   
 
 0.990
T1H0W8_MEGSC
Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.
   
 
 0.987
T1GHT4_MEGSC
Uncharacterized protein.
   
 
 0.983
T1GSC2_MEGSC
Uncharacterized protein.
   
   0.980
T1GLH1_MEGSC
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.
   
 
 0.977
T1GWM1_MEGSC
PUA domain-containing protein.
   
 
 0.975
T1GLR0_MEGSC
Uncharacterized protein.
   
 
 0.973
T1GA33_MEGSC
GN3L_Grn1 domain-containing protein.
   
 
 0.963
T1GE20_MEGSC
Uncharacterized protein.
   
 
 0.963
Your Current Organism:
Megaselia scalaris
NCBI taxonomy Id: 36166
Other names: M. scalaris
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