T1GZ85_MEGSC protein (Megaselia scalaris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

T1GZ85_MEGSC

Uncharacterized protein; Belongs to the TCP-1 chaperonin family. (251 aa)

Predicted Functional Partners:

T1GEE8_MEGSC

0.999

T1GJ02_MEGSC

0.999

T1GPM2_MEGSC

0.999

T1H6F8_MEGSC

0.999

T1GEE9_MEGSC

0.998

T1H6D7_MEGSC

0.998

T1GI19_MEGSC

0.997

T1GU09_MEGSC

0.997

T1GW94_MEGSC

0.997

T1H191_MEGSC

0.997

Your Current Organism:

Megaselia scalaris

NCBI taxonomy Id: 36166
Other names: M. scalaris

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T1GEE8_MEGSC	T1GI19_MEGSC	T1GEE8	T1GI19	Uncharacterized protein.	Uncharacterized protein.	0.988
T1GEE8_MEGSC	T1GJ02_MEGSC	T1GEE8	T1GJ02	Uncharacterized protein.	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	0.998
T1GEE8_MEGSC	T1GPM2_MEGSC	T1GEE8	T1GPM2	Uncharacterized protein.	Uncharacterized protein; Belongs to the TCP-1 chaperonin family.	0.999
T1GEE8_MEGSC	T1GU09_MEGSC	T1GEE8	T1GU09	Uncharacterized protein.	Uncharacterized protein.	0.990
T1GEE8_MEGSC	T1GW94_MEGSC	T1GEE8	T1GW94	Uncharacterized protein.	Uncharacterized protein.	0.992
T1GEE8_MEGSC	T1GZ85_MEGSC	T1GEE8	T1GZ85	Uncharacterized protein.	Uncharacterized protein; Belongs to the TCP-1 chaperonin family.	0.999
T1GEE8_MEGSC	T1H191_MEGSC	T1GEE8	T1H191	Uncharacterized protein.	Uncharacterized protein.	0.992
T1GEE8_MEGSC	T1H6D7_MEGSC	T1GEE8	T1H6D7	Uncharacterized protein.	Uncharacterized protein; Belongs to the TCP-1 chaperonin family.	0.991
T1GEE8_MEGSC	T1H6F8_MEGSC	T1GEE8	T1H6F8	Uncharacterized protein.	Uncharacterized protein; Belongs to the TCP-1 chaperonin family.	0.997
T1GEE9_MEGSC	T1GI19_MEGSC	T1GEE9	T1GI19	Uncharacterized protein.	Uncharacterized protein.	0.988
T1GEE9_MEGSC	T1GJ02_MEGSC	T1GEE9	T1GJ02	Uncharacterized protein.	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	0.998
T1GEE9_MEGSC	T1GPM2_MEGSC	T1GEE9	T1GPM2	Uncharacterized protein.	Uncharacterized protein; Belongs to the TCP-1 chaperonin family.	0.999
T1GEE9_MEGSC	T1GU09_MEGSC	T1GEE9	T1GU09	Uncharacterized protein.	Uncharacterized protein.	0.988
T1GEE9_MEGSC	T1GW94_MEGSC	T1GEE9	T1GW94	Uncharacterized protein.	Uncharacterized protein.	0.992
T1GEE9_MEGSC	T1GZ85_MEGSC	T1GEE9	T1GZ85	Uncharacterized protein.	Uncharacterized protein; Belongs to the TCP-1 chaperonin family.	0.998
T1GEE9_MEGSC	T1H191_MEGSC	T1GEE9	T1H191	Uncharacterized protein.	Uncharacterized protein.	0.992
T1GEE9_MEGSC	T1H6D7_MEGSC	T1GEE9	T1H6D7	Uncharacterized protein.	Uncharacterized protein; Belongs to the TCP-1 chaperonin family.	0.988
T1GEE9_MEGSC	T1H6F8_MEGSC	T1GEE9	T1H6F8	Uncharacterized protein.	Uncharacterized protein; Belongs to the TCP-1 chaperonin family.	0.997
T1GI19_MEGSC	T1GEE8_MEGSC	T1GI19	T1GEE8	Uncharacterized protein.	Uncharacterized protein.	0.988
T1GI19_MEGSC	T1GEE9_MEGSC	T1GI19	T1GEE9	Uncharacterized protein.	Uncharacterized protein.	0.988