Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AJF63296.1Beta-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (661 aa)    
Predicted Functional Partners:
AJF63297.1
Alpha-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.987
AJF69430.1
Alpha-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.980
AJF64662.1
Beta-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.923
AJF68965.1
Beta-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.923
araA
Arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
 
 
  0.923
AJF65952.1
Aldose epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.913
AJF70232.1
Aldose epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.913
AJF70111.1
Arabinogalactan endo-1 4-beta-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.900
AJF70206.1
Alpha-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.900
AJF69434.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.868
Your Current Organism:
Streptomyces vietnamensis
NCBI taxonomy Id: 362257
Other names: CCTCC M 205143, CCTCC:M:205143, IAM 15340, JCM 21785, S. vietnamensis, Streptomyces vietnamensis Zhu et al. 2007, strain GIMV4.0001
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