Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AJF63508.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (103 aa)    
Predicted Functional Partners:
AJF63509.1
Dienelactone hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.592
AJF63507.1
Polynucleotide kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.563
AJF69478.1
Polynucleotide kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.536
rnhA
Ribonuclease HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
       0.417
Your Current Organism:
Streptomyces vietnamensis
NCBI taxonomy Id: 362257
Other names: CCTCC M 205143, CCTCC:M:205143, IAM 15340, JCM 21785, S. vietnamensis, Streptomyces vietnamensis Zhu et al. 2007, strain GIMV4.0001
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