STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJF63672.1methoxymalonyl-ACP biosynthesis protein FkbH; Derived by automated computational analysis using gene prediction method: Protein Homology. (631 aa)    
Predicted Functional Partners:
AJF69508.1
3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.940
AJF63671.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.887
AJF69509.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.797
AJF63670.1
Phosphopantetheinyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the P-Pant transferase superfamily.
       0.796
AJF63673.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.769
AJF69499.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.712
AJF63664.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.700
AJF63674.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.644
AJF68318.1
Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.611
AJF69500.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.495
Your Current Organism:
Streptomyces vietnamensis
NCBI taxonomy Id: 362257
Other names: CCTCC M 205143, CCTCC:M:205143, IAM 15340, JCM 21785, S. vietnamensis, Streptomyces vietnamensis Zhu et al. 2007, strain GIMV4.0001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.