Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RC62_1112 | RC62_1115 | RC62_1112 | RC62_1115 | Glucosamine-6-phosphate deaminase. | N-acetylglucosamine-6-phosphate deacetylase. | 0.961 |
RC62_1112 | RC62_1116 | RC62_1112 | RC62_1116 | Glucosamine-6-phosphate deaminase. | Sialidase. | 0.486 |
RC62_1112 | RC62_1395 | RC62_1112 | RC62_1395 | Glucosamine-6-phosphate deaminase. | Glucosamine-6-phosphate isomerase. | 0.492 |
RC62_1112 | RC62_1429 | RC62_1112 | RC62_1429 | Glucosamine-6-phosphate deaminase. | Putative N-acetylglucosamine kinase. | 0.689 |
RC62_1112 | RC62_1520 | RC62_1112 | RC62_1520 | Glucosamine-6-phosphate deaminase. | Phosphoglucosamine mutase. | 0.640 |
RC62_1112 | RC62_2745 | RC62_1112 | RC62_2745 | Glucosamine-6-phosphate deaminase. | Glucosamine-6-phosphate isomerase. | 0.661 |
RC62_1112 | glmS | RC62_1112 | RC62_4503 | Glucosamine-6-phosphate deaminase. | Glutamine-fructose-6-phosphate aminotransferase [isomerizing]; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.671 |
RC62_1112 | nagB | RC62_1112 | RC62_1113 | Glucosamine-6-phosphate deaminase. | Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion. | 0.996 |
RC62_1112 | nagB-2 | RC62_1112 | RC62_1462 | Glucosamine-6-phosphate deaminase. | Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion. | 0.487 |
RC62_1115 | RC62_1112 | RC62_1115 | RC62_1112 | N-acetylglucosamine-6-phosphate deacetylase. | Glucosamine-6-phosphate deaminase. | 0.961 |
RC62_1115 | RC62_1116 | RC62_1115 | RC62_1116 | N-acetylglucosamine-6-phosphate deacetylase. | Sialidase. | 0.811 |
RC62_1115 | RC62_1395 | RC62_1115 | RC62_1395 | N-acetylglucosamine-6-phosphate deacetylase. | Glucosamine-6-phosphate isomerase. | 0.947 |
RC62_1115 | RC62_1429 | RC62_1115 | RC62_1429 | N-acetylglucosamine-6-phosphate deacetylase. | Putative N-acetylglucosamine kinase. | 0.874 |
RC62_1115 | RC62_1520 | RC62_1115 | RC62_1520 | N-acetylglucosamine-6-phosphate deacetylase. | Phosphoglucosamine mutase. | 0.854 |
RC62_1115 | RC62_2745 | RC62_1115 | RC62_2745 | N-acetylglucosamine-6-phosphate deacetylase. | Glucosamine-6-phosphate isomerase. | 0.954 |
RC62_1115 | glmS | RC62_1115 | RC62_4503 | N-acetylglucosamine-6-phosphate deacetylase. | Glutamine-fructose-6-phosphate aminotransferase [isomerizing]; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.831 |
RC62_1115 | murQ | RC62_1115 | RC62_2592 | N-acetylglucosamine-6-phosphate deacetylase. | N-acetylmuramic acid 6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate. | 0.969 |
RC62_1115 | nagB | RC62_1115 | RC62_1113 | N-acetylglucosamine-6-phosphate deacetylase. | Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion. | 0.979 |
RC62_1115 | nagB-2 | RC62_1115 | RC62_1462 | N-acetylglucosamine-6-phosphate deacetylase. | Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion. | 0.947 |
RC62_1116 | RC62_1112 | RC62_1116 | RC62_1112 | Sialidase. | Glucosamine-6-phosphate deaminase. | 0.486 |
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