Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RC62_1117 | RC62_1120 | RC62_1117 | RC62_1120 | N-acylglucosamine 2-epimerase. | Major facilitator family transporter. | 0.727 |
RC62_1117 | RC62_1121 | RC62_1117 | RC62_1121 | N-acylglucosamine 2-epimerase. | Sialic acid-induced transmembrane protein YjhT(NanM). | 0.798 |
RC62_1117 | RC62_1122 | RC62_1117 | RC62_1122 | N-acylglucosamine 2-epimerase. | N-acetylneuraminate lyase; Belongs to the DapA family. | 0.889 |
RC62_1117 | RC62_1123 | RC62_1117 | RC62_1123 | N-acylglucosamine 2-epimerase. | Putative outer membrane protein. | 0.545 |
RC62_1117 | dapA | RC62_1117 | RC62_2376 | N-acylglucosamine 2-epimerase. | Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.493 |
RC62_1120 | RC62_1117 | RC62_1120 | RC62_1117 | Major facilitator family transporter. | N-acylglucosamine 2-epimerase. | 0.727 |
RC62_1120 | RC62_1121 | RC62_1120 | RC62_1121 | Major facilitator family transporter. | Sialic acid-induced transmembrane protein YjhT(NanM). | 0.863 |
RC62_1120 | RC62_1122 | RC62_1120 | RC62_1122 | Major facilitator family transporter. | N-acetylneuraminate lyase; Belongs to the DapA family. | 0.840 |
RC62_1120 | RC62_1123 | RC62_1120 | RC62_1123 | Major facilitator family transporter. | Putative outer membrane protein. | 0.620 |
RC62_1121 | RC62_1117 | RC62_1121 | RC62_1117 | Sialic acid-induced transmembrane protein YjhT(NanM). | N-acylglucosamine 2-epimerase. | 0.798 |
RC62_1121 | RC62_1120 | RC62_1121 | RC62_1120 | Sialic acid-induced transmembrane protein YjhT(NanM). | Major facilitator family transporter. | 0.863 |
RC62_1121 | RC62_1122 | RC62_1121 | RC62_1122 | Sialic acid-induced transmembrane protein YjhT(NanM). | N-acetylneuraminate lyase; Belongs to the DapA family. | 0.942 |
RC62_1121 | RC62_1123 | RC62_1121 | RC62_1123 | Sialic acid-induced transmembrane protein YjhT(NanM). | Putative outer membrane protein. | 0.863 |
RC62_1122 | RC62_1117 | RC62_1122 | RC62_1117 | N-acetylneuraminate lyase; Belongs to the DapA family. | N-acylglucosamine 2-epimerase. | 0.889 |
RC62_1122 | RC62_1120 | RC62_1122 | RC62_1120 | N-acetylneuraminate lyase; Belongs to the DapA family. | Major facilitator family transporter. | 0.840 |
RC62_1122 | RC62_1121 | RC62_1122 | RC62_1121 | N-acetylneuraminate lyase; Belongs to the DapA family. | Sialic acid-induced transmembrane protein YjhT(NanM). | 0.942 |
RC62_1122 | RC62_1123 | RC62_1122 | RC62_1123 | N-acetylneuraminate lyase; Belongs to the DapA family. | Putative outer membrane protein. | 0.781 |
RC62_1122 | RC62_1759 | RC62_1122 | RC62_1759 | N-acetylneuraminate lyase; Belongs to the DapA family. | Aspartate kinase. | 0.883 |
RC62_1122 | RC62_1760 | RC62_1122 | RC62_1760 | N-acetylneuraminate lyase; Belongs to the DapA family. | Homoserine acetyltransferase; Belongs to the AB hydrolase superfamily. MetX family. | 0.883 |
RC62_1122 | RC62_2221 | RC62_1122 | RC62_2221 | N-acetylneuraminate lyase; Belongs to the DapA family. | Dihydrodipicolinate reductase; Belongs to the DapB family. | 0.827 |
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