Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RC62_137Luciferase. (335 aa)    
Predicted Functional Partners:
RC62_1749
Sulfite reductase, beta subunit (Hemoprotein).
     
 0.694
RC62_603
Oxidoreductase FAD-binding domain Oxidoreductase NAD-binding domain Flavodoxin.
     
 0.684
metG
Methionine-tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
     
  0.652
purL
Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain-containing protein; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate.
    
  0.649
RC62_1334
Putative anaerobic dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
    
 0.624
RC62_1648
Flavin reductase domain protein fmn-binding protein.
  
 
 0.619
RC62_4099
Nonribosomal peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
    
 0.614
RC62_4107
Nonribosomal peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
    
 0.614
RC62_2643
Putative flavoprotein.
  
 0.611
RC62_2935
NADPH-dependent FMN reductase.
  
 0.611
Your Current Organism:
Flavobacterium aquidurense
NCBI taxonomy Id: 362413
Other names: CIP 109242, DSM 18293, F. aquidurense, Flavobacterium aquidurense Cousin et al. 2007 emend. Kim et al. 2014, Flavobacterium aquidurense Cousin et al. 2007 emend. Loch and Faisal 2014, Flavobacterium sp. WB-1.1.56, Flavobacterium sp. WB1.1-14, Flavobacterium sp. WB1.1-4, Flavobacterium sp. WB1.1-57, Flavobacterium sp. WB1.1-63, WB 1.1-56
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