Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RC62_1238 | RC62_1810 | RC62_1238 | RC62_1810 | Multi-sensor hybrid histidine kinase. | GAF domain-containing protein. | 0.551 |
RC62_1238 | RC62_2248 | RC62_1238 | RC62_2248 | Multi-sensor hybrid histidine kinase. | Multi-sensor hybrid histidine kinase/response regulator. | 0.999 |
RC62_1238 | RC62_3625 | RC62_1238 | RC62_3625 | Multi-sensor hybrid histidine kinase. | GAF sensor hybrid histidine kinase. | 0.999 |
RC62_1238 | msrA-3 | RC62_1238 | RC62_3949 | Multi-sensor hybrid histidine kinase. | Peptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.571 |
RC62_1808 | RC62_1809 | RC62_1808 | RC62_1809 | Exosortase F-associated protein. | Exosortase family protein XrtF. | 0.891 |
RC62_1808 | RC62_1810 | RC62_1808 | RC62_1810 | Exosortase F-associated protein. | GAF domain-containing protein. | 0.491 |
RC62_1809 | RC62_1808 | RC62_1809 | RC62_1808 | Exosortase family protein XrtF. | Exosortase F-associated protein. | 0.891 |
RC62_1809 | RC62_1810 | RC62_1809 | RC62_1810 | Exosortase family protein XrtF. | GAF domain-containing protein. | 0.643 |
RC62_1810 | RC62_1238 | RC62_1810 | RC62_1238 | GAF domain-containing protein. | Multi-sensor hybrid histidine kinase. | 0.551 |
RC62_1810 | RC62_1808 | RC62_1810 | RC62_1808 | GAF domain-containing protein. | Exosortase F-associated protein. | 0.491 |
RC62_1810 | RC62_1809 | RC62_1810 | RC62_1809 | GAF domain-containing protein. | Exosortase family protein XrtF. | 0.643 |
RC62_1810 | RC62_2248 | RC62_1810 | RC62_2248 | GAF domain-containing protein. | Multi-sensor hybrid histidine kinase/response regulator. | 0.690 |
RC62_1810 | RC62_3625 | RC62_1810 | RC62_3625 | GAF domain-containing protein. | GAF sensor hybrid histidine kinase. | 0.889 |
RC62_1810 | RC62_3940 | RC62_1810 | RC62_3940 | GAF domain-containing protein. | Alkylhydroperoxidase AhpD family core domain-containing protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family. | 0.749 |
RC62_1810 | RC62_4334 | RC62_1810 | RC62_4334 | GAF domain-containing protein. | Acetyltransferase (GNAT) family protein. | 0.460 |
RC62_1810 | msrA-3 | RC62_1810 | RC62_3949 | GAF domain-containing protein. | Peptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.405 |
RC62_1810 | rpsO | RC62_1810 | RC62_1811 | GAF domain-containing protein. | 30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.463 |
RC62_2248 | RC62_1238 | RC62_2248 | RC62_1238 | Multi-sensor hybrid histidine kinase/response regulator. | Multi-sensor hybrid histidine kinase. | 0.999 |
RC62_2248 | RC62_1810 | RC62_2248 | RC62_1810 | Multi-sensor hybrid histidine kinase/response regulator. | GAF domain-containing protein. | 0.690 |
RC62_2248 | RC62_3625 | RC62_2248 | RC62_3625 | Multi-sensor hybrid histidine kinase/response regulator. | GAF sensor hybrid histidine kinase. | 0.999 |
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