STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RC62_2407Hypothetical protein. (210 aa)    
Predicted Functional Partners:
RC62_2013
Hypothetical protein.
  
     0.703
RC62_4202
Thioredoxin reductase.
  
     0.695
RC62_1880
Hypothetical protein.
  
     0.683
RC62_4655
Hypothetical protein.
  
     0.680
RC62_3649
Hypothetical protein.
  
     0.679
RC62_4654
Hypothetical protein.
  
     0.671
RC62_4208
Tellurite resistance protein TerB.
  
     0.658
RC62_1845
Hypothetical protein.
  
     0.654
RC62_1707
Cation transport ATPase.
  
     0.633
RC62_2085
Putative lipoprotein.
  
     0.629
Your Current Organism:
Flavobacterium aquidurense
NCBI taxonomy Id: 362413
Other names: CIP 109242, DSM 18293, F. aquidurense, Flavobacterium aquidurense Cousin et al. 2007 emend. Kim et al. 2014, Flavobacterium aquidurense Cousin et al. 2007 emend. Loch and Faisal 2014, Flavobacterium sp. WB-1.1.56, Flavobacterium sp. WB1.1-14, Flavobacterium sp. WB1.1-4, Flavobacterium sp. WB1.1-57, Flavobacterium sp. WB1.1-63, WB 1.1-56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.