STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RC62_2429Glycerophosphoryl diester phosphodiesterase. (262 aa)    
Predicted Functional Partners:
RC62_2428
Coagulation factor 5/8 type domain-containing protein.
 
     0.811
RC62_1863
Glycerophosphoryl diester phosphodiesterase.
  
  
 
0.726
RC62_2689
Glycoside hydrolase family 16.
 
   
  0.707
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
 
 
 0.697
RC62_3003
FAD/FMN-dependent dehydrogenase.
  
 
 0.667
RC62_1029
Glycerol-3-phosphate dehydrogenase.
  
 0.666
RC62_2427
Peptidase family M28.
  
    0.657
mqo
Putative malate:quinone oxidoreductase.
    
 0.546
RC62_1027
MIP family glycerol uptake facilitator protein GlpF; Belongs to the MIP/aquaporin (TC 1.A.8) family.
 
 
 0.519
RC62_2430
Putative beta-glucosidase Glycoside hydrolase family 3; Belongs to the glycosyl hydrolase 3 family.
       0.513
Your Current Organism:
Flavobacterium aquidurense
NCBI taxonomy Id: 362413
Other names: CIP 109242, DSM 18293, F. aquidurense, Flavobacterium aquidurense Cousin et al. 2007 emend. Kim et al. 2014, Flavobacterium aquidurense Cousin et al. 2007 emend. Loch and Faisal 2014, Flavobacterium sp. WB-1.1.56, Flavobacterium sp. WB1.1-14, Flavobacterium sp. WB1.1-4, Flavobacterium sp. WB1.1-57, Flavobacterium sp. WB1.1-63, WB 1.1-56
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.