Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
RC62_1110 | RC62_2712 | Hypothetical protein. | Blue (Type 1) copper domain protein. | 0.521 |
RC62_2318 | RC62_2712 | Alkaline phosphatase. | Blue (Type 1) copper domain protein. | 0.522 |
RC62_2711 | RC62_2712 | Hemerythrin HHE cation binding domain-containing protein; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family. | Blue (Type 1) copper domain protein. | 0.515 |
RC62_2711 | RC62_2713 | Hemerythrin HHE cation binding domain-containing protein; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family. | Transcriptional regulator, BadM/Rrf2 family. | 0.885 |
RC62_2712 | RC62_1110 | Blue (Type 1) copper domain protein. | Hypothetical protein. | 0.521 |
RC62_2712 | RC62_2318 | Blue (Type 1) copper domain protein. | Alkaline phosphatase. | 0.522 |
RC62_2712 | RC62_2711 | Blue (Type 1) copper domain protein. | Hemerythrin HHE cation binding domain-containing protein; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family. | 0.515 |
RC62_2712 | RC62_2713 | Blue (Type 1) copper domain protein. | Transcriptional regulator, BadM/Rrf2 family. | 0.701 |
RC62_2712 | RC62_2714 | Blue (Type 1) copper domain protein. | Hypothetical protein. | 0.506 |
RC62_2712 | RC62_2715 | Blue (Type 1) copper domain protein. | Maebl. | 0.571 |
RC62_2712 | RC62_3184 | Blue (Type 1) copper domain protein. | Lipoprotein. | 0.522 |
RC62_2712 | RC62_4138 | Blue (Type 1) copper domain protein. | Lipoprotein. | 0.522 |
RC62_2713 | RC62_2711 | Transcriptional regulator, BadM/Rrf2 family. | Hemerythrin HHE cation binding domain-containing protein; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family. | 0.885 |
RC62_2713 | RC62_2712 | Transcriptional regulator, BadM/Rrf2 family. | Blue (Type 1) copper domain protein. | 0.701 |
RC62_2713 | RC62_2714 | Transcriptional regulator, BadM/Rrf2 family. | Hypothetical protein. | 0.554 |
RC62_2713 | RC62_2715 | Transcriptional regulator, BadM/Rrf2 family. | Maebl. | 0.554 |
RC62_2714 | RC62_2712 | Hypothetical protein. | Blue (Type 1) copper domain protein. | 0.506 |
RC62_2714 | RC62_2713 | Hypothetical protein. | Transcriptional regulator, BadM/Rrf2 family. | 0.554 |
RC62_2714 | RC62_2715 | Hypothetical protein. | Maebl. | 0.773 |
RC62_2715 | RC62_2712 | Maebl. | Blue (Type 1) copper domain protein. | 0.571 |
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