Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
RC62_1504 | RC62_3541 | Amino acid adenylation domain protein; Belongs to the ATP-dependent AMP-binding enzyme family. | Hypothetical protein. | 0.729 |
RC62_1504 | RC62_4099 | Amino acid adenylation domain protein; Belongs to the ATP-dependent AMP-binding enzyme family. | Nonribosomal peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.999 |
RC62_1504 | RC62_4107 | Amino acid adenylation domain protein; Belongs to the ATP-dependent AMP-binding enzyme family. | Nonribosomal peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.999 |
RC62_1504 | RC62_4108 | Amino acid adenylation domain protein; Belongs to the ATP-dependent AMP-binding enzyme family. | Beta-ketoacyl synthase. | 0.999 |
RC62_1504 | RC62_4109 | Amino acid adenylation domain protein; Belongs to the ATP-dependent AMP-binding enzyme family. | Nonribosomal peptide synthetase. | 0.999 |
RC62_1504 | RC62_4112 | Amino acid adenylation domain protein; Belongs to the ATP-dependent AMP-binding enzyme family. | Amino acid adenylation domain protein. | 0.999 |
RC62_3540 | RC62_3541 | Flavodoxin. | Hypothetical protein. | 0.883 |
RC62_3540 | RC62_3542 | Flavodoxin. | SnoaL 3 domain containing protein. | 0.913 |
RC62_3540 | RC62_3543 | Flavodoxin. | Putative oxidoreductase, aryl-alcohol dehydrogenase like protein. | 0.543 |
RC62_3540 | RC62_3544 | Flavodoxin. | Aldo/keto reductase, diketogulonate reductase. | 0.708 |
RC62_3541 | RC62_1504 | Hypothetical protein. | Amino acid adenylation domain protein; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.729 |
RC62_3541 | RC62_3540 | Hypothetical protein. | Flavodoxin. | 0.883 |
RC62_3541 | RC62_3542 | Hypothetical protein. | SnoaL 3 domain containing protein. | 0.919 |
RC62_3541 | RC62_3543 | Hypothetical protein. | Putative oxidoreductase, aryl-alcohol dehydrogenase like protein. | 0.625 |
RC62_3541 | RC62_3544 | Hypothetical protein. | Aldo/keto reductase, diketogulonate reductase. | 0.639 |
RC62_3541 | RC62_4099 | Hypothetical protein. | Nonribosomal peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.925 |
RC62_3541 | RC62_4107 | Hypothetical protein. | Nonribosomal peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.925 |
RC62_3541 | RC62_4108 | Hypothetical protein. | Beta-ketoacyl synthase. | 0.797 |
RC62_3541 | RC62_4109 | Hypothetical protein. | Nonribosomal peptide synthetase. | 0.760 |
RC62_3541 | RC62_4112 | Hypothetical protein. | Amino acid adenylation domain protein. | 0.782 |
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