Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
RC62_3268 | RC62_3269 | Biopolymer transport protein ExbD/TolR. | Biopolymer transport protein ExbD/TolR. | 0.686 |
RC62_3268 | RC62_3997 | Biopolymer transport protein ExbD/TolR. | Gram-negative bacterial tonB protein. | 0.876 |
RC62_3268 | RC62_4159 | Biopolymer transport protein ExbD/TolR. | Threonine dehydrogenase and related Zn-dependent dehydrogenase. | 0.743 |
RC62_3268 | RC62_4160 | Biopolymer transport protein ExbD/TolR. | ABC-type phosphate transport system periplasmic component-like protein. | 0.788 |
RC62_3268 | RC62_4162 | Biopolymer transport protein ExbD/TolR. | TonB family protein. | 0.913 |
RC62_3268 | RC62_4164 | Biopolymer transport protein ExbD/TolR. | Biopolymer transport protein. | 0.804 |
RC62_3268 | RC62_4165 | Biopolymer transport protein ExbD/TolR. | Biopolymer transport protein. | 0.955 |
RC62_3269 | RC62_3268 | Biopolymer transport protein ExbD/TolR. | Biopolymer transport protein ExbD/TolR. | 0.686 |
RC62_3269 | RC62_3997 | Biopolymer transport protein ExbD/TolR. | Gram-negative bacterial tonB protein. | 0.882 |
RC62_3269 | RC62_4159 | Biopolymer transport protein ExbD/TolR. | Threonine dehydrogenase and related Zn-dependent dehydrogenase. | 0.770 |
RC62_3269 | RC62_4160 | Biopolymer transport protein ExbD/TolR. | ABC-type phosphate transport system periplasmic component-like protein. | 0.800 |
RC62_3269 | RC62_4162 | Biopolymer transport protein ExbD/TolR. | TonB family protein. | 0.917 |
RC62_3269 | RC62_4164 | Biopolymer transport protein ExbD/TolR. | Biopolymer transport protein. | 0.800 |
RC62_3269 | RC62_4165 | Biopolymer transport protein ExbD/TolR. | Biopolymer transport protein. | 0.958 |
RC62_3997 | RC62_3268 | Gram-negative bacterial tonB protein. | Biopolymer transport protein ExbD/TolR. | 0.876 |
RC62_3997 | RC62_3269 | Gram-negative bacterial tonB protein. | Biopolymer transport protein ExbD/TolR. | 0.882 |
RC62_3997 | RC62_4159 | Gram-negative bacterial tonB protein. | Threonine dehydrogenase and related Zn-dependent dehydrogenase. | 0.620 |
RC62_3997 | RC62_4160 | Gram-negative bacterial tonB protein. | ABC-type phosphate transport system periplasmic component-like protein. | 0.668 |
RC62_3997 | RC62_4163 | Gram-negative bacterial tonB protein. | Biopolymer transport protein. | 0.874 |
RC62_3997 | RC62_4164 | Gram-negative bacterial tonB protein. | Biopolymer transport protein. | 0.878 |
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