Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RC62_2092 | RC62_4183 | RC62_2092 | RC62_4183 | Putative lipoprotein. | Transglutaminase-like superfamily protein. | 0.449 |
RC62_2092 | RC62_4184 | RC62_2092 | RC62_4184 | Putative lipoprotein. | Transglutaminase-like superfamily protein. | 0.464 |
RC62_2092 | RC62_4185 | RC62_2092 | RC62_4185 | Putative lipoprotein. | Putative cysteine protease/Transglutaminase-like enzyme. | 0.431 |
RC62_2092 | guaA | RC62_2092 | RC62_2749 | Putative lipoprotein. | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | 0.720 |
RC62_3278 | RC62_4183 | RC62_3278 | RC62_4183 | Major facilitator transporter. | Transglutaminase-like superfamily protein. | 0.472 |
RC62_3278 | RC62_4184 | RC62_3278 | RC62_4184 | Major facilitator transporter. | Transglutaminase-like superfamily protein. | 0.494 |
RC62_3278 | RC62_4185 | RC62_3278 | RC62_4185 | Major facilitator transporter. | Putative cysteine protease/Transglutaminase-like enzyme. | 0.441 |
RC62_3825 | RC62_4183 | RC62_3825 | RC62_4183 | SusC-like TonB-dependent receptor. | Transglutaminase-like superfamily protein. | 0.451 |
RC62_3825 | RC62_4184 | RC62_3825 | RC62_4184 | SusC-like TonB-dependent receptor. | Transglutaminase-like superfamily protein. | 0.449 |
RC62_4182 | RC62_4183 | RC62_4182 | RC62_4183 | MazG nucleotide pyrophosphohydrolase. | Transglutaminase-like superfamily protein. | 0.801 |
RC62_4182 | RC62_4184 | RC62_4182 | RC62_4184 | MazG nucleotide pyrophosphohydrolase. | Transglutaminase-like superfamily protein. | 0.801 |
RC62_4182 | RC62_4185 | RC62_4182 | RC62_4185 | MazG nucleotide pyrophosphohydrolase. | Putative cysteine protease/Transglutaminase-like enzyme. | 0.832 |
RC62_4182 | aroA | RC62_4182 | RC62_4181 | MazG nucleotide pyrophosphohydrolase. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.865 |
RC62_4182 | dtd | RC62_4182 | RC62_4186 | MazG nucleotide pyrophosphohydrolase. | D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family. | 0.695 |
RC62_4182 | guaA | RC62_4182 | RC62_2749 | MazG nucleotide pyrophosphohydrolase. | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | 0.802 |
RC62_4182 | rsgA | RC62_4182 | RC62_4187 | MazG nucleotide pyrophosphohydrolase. | Putative ribosome biogenesis GTPase RsgA; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | 0.536 |
RC62_4183 | RC62_2092 | RC62_4183 | RC62_2092 | Transglutaminase-like superfamily protein. | Putative lipoprotein. | 0.449 |
RC62_4183 | RC62_3278 | RC62_4183 | RC62_3278 | Transglutaminase-like superfamily protein. | Major facilitator transporter. | 0.472 |
RC62_4183 | RC62_3825 | RC62_4183 | RC62_3825 | Transglutaminase-like superfamily protein. | SusC-like TonB-dependent receptor. | 0.451 |
RC62_4183 | RC62_4182 | RC62_4183 | RC62_4182 | Transglutaminase-like superfamily protein. | MazG nucleotide pyrophosphohydrolase. | 0.801 |
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