STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RC62_4201Hypothetical protein. (66 aa)    
Predicted Functional Partners:
RC62_4202
Thioredoxin reductase.
 
     0.836
RC62_3194
Hypothetical protein.
  
     0.769
RC62_1787
2TM domain containing protein.
  
     0.766
RC62_2681
Hypothetical protein.
  
     0.762
RC62_1571
Hypothetical protein.
  
     0.755
RC62_534
Putative integral membrane protein.
  
     0.742
RC62_2377
Hypothetical protein.
  
     0.738
RC62_4234
DUF4271 domain containing protein.
  
     0.735
RC62_1878
Hypothetical protein.
  
     0.733
RC62_4375
Putative transcriptional regulator with HTH domain-containing protein.
  
     0.729
Your Current Organism:
Flavobacterium aquidurense
NCBI taxonomy Id: 362413
Other names: CIP 109242, DSM 18293, F. aquidurense, Flavobacterium aquidurense Cousin et al. 2007 emend. Kim et al. 2014, Flavobacterium aquidurense Cousin et al. 2007 emend. Loch and Faisal 2014, Flavobacterium sp. WB-1.1.56, Flavobacterium sp. WB1.1-14, Flavobacterium sp. WB1.1-4, Flavobacterium sp. WB1.1-57, Flavobacterium sp. WB1.1-63, WB 1.1-56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.