Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
RC62_1866 | RC62_2051 | Hypothetical protein. | Hypothetical protein. | 0.574 |
RC62_1866 | RC62_4657 | Hypothetical protein. | Hypothetical protein. | 0.486 |
RC62_1923 | RC62_4657 | SnoaL 3 domain containing protein. | Hypothetical protein. | 0.631 |
RC62_2051 | RC62_1866 | Hypothetical protein. | Hypothetical protein. | 0.574 |
RC62_2051 | RC62_415 | Hypothetical protein. | Hypothetical protein. | 0.552 |
RC62_2051 | RC62_4657 | Hypothetical protein. | Hypothetical protein. | 0.546 |
RC62_3252 | RC62_4657 | Putative sensor of ECF-type sigma factor. | Hypothetical protein. | 0.442 |
RC62_415 | RC62_2051 | Hypothetical protein. | Hypothetical protein. | 0.552 |
RC62_415 | RC62_4657 | Hypothetical protein. | Hypothetical protein. | 0.658 |
RC62_4656 | RC62_4657 | DNA polymerase III, gamma/tau subunit. | Hypothetical protein. | 0.828 |
RC62_4656 | RC62_4658 | DNA polymerase III, gamma/tau subunit. | Thioesterase superfamily protein. | 0.516 |
RC62_4657 | RC62_1866 | Hypothetical protein. | Hypothetical protein. | 0.486 |
RC62_4657 | RC62_1923 | Hypothetical protein. | SnoaL 3 domain containing protein. | 0.631 |
RC62_4657 | RC62_2051 | Hypothetical protein. | Hypothetical protein. | 0.546 |
RC62_4657 | RC62_3252 | Hypothetical protein. | Putative sensor of ECF-type sigma factor. | 0.442 |
RC62_4657 | RC62_415 | Hypothetical protein. | Hypothetical protein. | 0.658 |
RC62_4657 | RC62_4656 | Hypothetical protein. | DNA polymerase III, gamma/tau subunit. | 0.828 |
RC62_4657 | RC62_4658 | Hypothetical protein. | Thioesterase superfamily protein. | 0.516 |
RC62_4658 | RC62_4656 | Thioesterase superfamily protein. | DNA polymerase III, gamma/tau subunit. | 0.516 |
RC62_4658 | RC62_4657 | Thioesterase superfamily protein. | Hypothetical protein. | 0.516 |