STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RC62_511Carbonic anhydrase/acetyltransferase isoleucine patch superfamily-like protein. (172 aa)    
Predicted Functional Partners:
RC62_1190
Carbonic anhydrase.
    
 0.806
RC62_1279
Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
    
 0.806
RC62_1385
Carbonic anhydrase.
    
 0.806
RC62_512
Putative Bacteroidetes-specific membrane protein.
       0.781
RC62_989
Glyoxalase/bleomycin resistance protein/dioxygenase.
 
 
    0.724
RC62_2119
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
  0.600
RC62_513
Nitrogen-fixing NifU domain protein.
       0.589
pgk
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
    
  0.572
eno
Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
    
  0.556
RC62_2152
Galactose-1-phosphate uridylyltransferase.
    
  0.499
Your Current Organism:
Flavobacterium aquidurense
NCBI taxonomy Id: 362413
Other names: CIP 109242, DSM 18293, F. aquidurense, Flavobacterium aquidurense Cousin et al. 2007 emend. Kim et al. 2014, Flavobacterium aquidurense Cousin et al. 2007 emend. Loch and Faisal 2014, Flavobacterium sp. WB-1.1.56, Flavobacterium sp. WB1.1-14, Flavobacterium sp. WB1.1-4, Flavobacterium sp. WB1.1-57, Flavobacterium sp. WB1.1-63, WB 1.1-56
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