Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
RC62_1238 | RC62_2209 | Multi-sensor hybrid histidine kinase. | Putative transcriptional regulator, Crp/Fnr family. | 0.716 |
RC62_1238 | RC62_2248 | Multi-sensor hybrid histidine kinase. | Multi-sensor hybrid histidine kinase/response regulator. | 0.999 |
RC62_1238 | RC62_2965 | Multi-sensor hybrid histidine kinase. | Glutamate synthase (NADH) large subunit. | 0.755 |
RC62_1238 | RC62_3104 | Multi-sensor hybrid histidine kinase. | cAMP-binding protein. | 0.716 |
RC62_1238 | RC62_3625 | Multi-sensor hybrid histidine kinase. | GAF sensor hybrid histidine kinase. | 0.999 |
RC62_1238 | RC62_578 | Multi-sensor hybrid histidine kinase. | Cyclic nucleotide-binding protein. | 0.716 |
RC62_2209 | RC62_1238 | Putative transcriptional regulator, Crp/Fnr family. | Multi-sensor hybrid histidine kinase. | 0.716 |
RC62_2209 | RC62_2248 | Putative transcriptional regulator, Crp/Fnr family. | Multi-sensor hybrid histidine kinase/response regulator. | 0.659 |
RC62_2209 | RC62_2965 | Putative transcriptional regulator, Crp/Fnr family. | Glutamate synthase (NADH) large subunit. | 0.777 |
RC62_2209 | RC62_3625 | Putative transcriptional regulator, Crp/Fnr family. | GAF sensor hybrid histidine kinase. | 0.895 |
RC62_2209 | RC62_578 | Putative transcriptional regulator, Crp/Fnr family. | Cyclic nucleotide-binding protein. | 0.761 |
RC62_2248 | RC62_1238 | Multi-sensor hybrid histidine kinase/response regulator. | Multi-sensor hybrid histidine kinase. | 0.999 |
RC62_2248 | RC62_2209 | Multi-sensor hybrid histidine kinase/response regulator. | Putative transcriptional regulator, Crp/Fnr family. | 0.659 |
RC62_2248 | RC62_2965 | Multi-sensor hybrid histidine kinase/response regulator. | Glutamate synthase (NADH) large subunit. | 0.522 |
RC62_2248 | RC62_3104 | Multi-sensor hybrid histidine kinase/response regulator. | cAMP-binding protein. | 0.659 |
RC62_2248 | RC62_3625 | Multi-sensor hybrid histidine kinase/response regulator. | GAF sensor hybrid histidine kinase. | 0.999 |
RC62_2248 | RC62_578 | Multi-sensor hybrid histidine kinase/response regulator. | Cyclic nucleotide-binding protein. | 0.659 |
RC62_2965 | RC62_1238 | Glutamate synthase (NADH) large subunit. | Multi-sensor hybrid histidine kinase. | 0.755 |
RC62_2965 | RC62_2209 | Glutamate synthase (NADH) large subunit. | Putative transcriptional regulator, Crp/Fnr family. | 0.777 |
RC62_2965 | RC62_2248 | Glutamate synthase (NADH) large subunit. | Multi-sensor hybrid histidine kinase/response regulator. | 0.522 |
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