Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
RC62_628Pectinesterase. (125 aa)    
Predicted Functional Partners:
RC62_629
Pectinesterase.
  
 0.996
RC62_9
Esterase/lipase.
  
 0.972
RC62_646
Polygalacturonase-like protein Glycoside hydrolase family 28; Belongs to the glycosyl hydrolase 28 family.
 
  
 0.887
RC62_12
Glycoside hydrolase; Belongs to the glycosyl hydrolase 28 family.
 
  
 0.886
RC62_2
Endopolygalacturonase; Belongs to the glycosyl hydrolase 28 family.
 
  
 0.886
RC62_619
Polygalacturonase-like protein Glycoside hydrolase family 28; Belongs to the glycosyl hydrolase 28 family.
 
  
 0.884
RC62_5
Putative d-4,5-unsaturated beta-glycuronidase Glycoside hydrolase family 105.
 
  
  0.858
RC62_784
Putative beta glycuronase Glycoside hydrolase family 28; Belongs to the glycosyl hydrolase 28 family.
 
  
 0.858
RC62_6
Putative d-4,5-unsaturated beta-glycuronidase Glycoside hydrolase family 105.
 
  
  0.857
RC62_7
Putative d-4,5-unsaturated beta-glycuronidase Glycoside hydrolase family 105.
 
  
  0.857
Your Current Organism:
Flavobacterium aquidurense
NCBI taxonomy Id: 362413
Other names: CIP 109242, DSM 18293, F. aquidurense, Flavobacterium aquidurense Cousin et al. 2007 emend. Kim et al. 2014, Flavobacterium aquidurense Cousin et al. 2007 emend. Loch and Faisal 2014, Flavobacterium sp. WB-1.1.56, Flavobacterium sp. WB1.1-14, Flavobacterium sp. WB1.1-4, Flavobacterium sp. WB1.1-57, Flavobacterium sp. WB1.1-63, WB 1.1-56
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