Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RC62_1163 | RC62_879 | RC62_1163 | RC62_879 | Beta-lactamase. | Beta-lactamase. | 0.456 |
RC62_1163 | guaA | RC62_1163 | RC62_2749 | Beta-lactamase. | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | 0.462 |
RC62_2440 | RC62_879 | RC62_2440 | RC62_879 | Superfamily II helicase. | Beta-lactamase. | 0.515 |
RC62_4090 | RC62_879 | RC62_4090 | RC62_879 | Putative penicillin-binding protein. | Beta-lactamase. | 0.580 |
RC62_4090 | guaA | RC62_4090 | RC62_2749 | Putative penicillin-binding protein. | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | 0.462 |
RC62_4096 | RC62_879 | RC62_4096 | RC62_879 | Beta-lactamase. | Beta-lactamase. | 0.559 |
RC62_4096 | guaA | RC62_4096 | RC62_2749 | Beta-lactamase. | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | 0.462 |
RC62_877 | RC62_878 | RC62_877 | RC62_878 | NAD-dependent epimerase/dehydratase. | Transcriptional regulator, BadM/Rrf2 family. | 0.817 |
RC62_877 | RC62_879 | RC62_877 | RC62_879 | NAD-dependent epimerase/dehydratase. | Beta-lactamase. | 0.408 |
RC62_878 | RC62_877 | RC62_878 | RC62_877 | Transcriptional regulator, BadM/Rrf2 family. | NAD-dependent epimerase/dehydratase. | 0.817 |
RC62_878 | RC62_879 | RC62_878 | RC62_879 | Transcriptional regulator, BadM/Rrf2 family. | Beta-lactamase. | 0.507 |
RC62_878 | RC62_881 | RC62_878 | RC62_881 | Transcriptional regulator, BadM/Rrf2 family. | Arabinose efflux permease family protein. | 0.415 |
RC62_879 | RC62_1163 | RC62_879 | RC62_1163 | Beta-lactamase. | Beta-lactamase. | 0.456 |
RC62_879 | RC62_2440 | RC62_879 | RC62_2440 | Beta-lactamase. | Superfamily II helicase. | 0.515 |
RC62_879 | RC62_4090 | RC62_879 | RC62_4090 | Beta-lactamase. | Putative penicillin-binding protein. | 0.580 |
RC62_879 | RC62_4096 | RC62_879 | RC62_4096 | Beta-lactamase. | Beta-lactamase. | 0.559 |
RC62_879 | RC62_877 | RC62_879 | RC62_877 | Beta-lactamase. | NAD-dependent epimerase/dehydratase. | 0.408 |
RC62_879 | RC62_878 | RC62_879 | RC62_878 | Beta-lactamase. | Transcriptional regulator, BadM/Rrf2 family. | 0.507 |
RC62_879 | RC62_880 | RC62_879 | RC62_880 | Beta-lactamase. | Putative permease. | 0.429 |
RC62_879 | RC62_881 | RC62_879 | RC62_881 | Beta-lactamase. | Arabinose efflux permease family protein. | 0.405 |
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