Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RC62_1743 | RC62_899 | RC62_1743 | RC62_899 | Cobalamin-dependent methionine synthase I. | ATP-cobalamin adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family. | 0.495 |
RC62_2164 | RC62_899 | RC62_2164 | RC62_899 | Dialkylrecorsinol condensing enzyme DarA. | ATP-cobalamin adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family. | 0.483 |
RC62_3175 | RC62_3179 | RC62_3175 | RC62_3179 | ABC transporter related protein. | Adenosylcobinamide kinase. | 0.642 |
RC62_3175 | RC62_899 | RC62_3175 | RC62_899 | ABC transporter related protein. | ATP-cobalamin adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family. | 0.510 |
RC62_3179 | RC62_3175 | RC62_3179 | RC62_3175 | Adenosylcobinamide kinase. | ABC transporter related protein. | 0.642 |
RC62_3179 | RC62_899 | RC62_3179 | RC62_899 | Adenosylcobinamide kinase. | ATP-cobalamin adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family. | 0.930 |
RC62_3179 | cobS | RC62_3179 | RC62_3181 | Adenosylcobinamide kinase. | Cobalamin synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family. | 0.993 |
RC62_3179 | cobT | RC62_3179 | RC62_3180 | Adenosylcobinamide kinase. | Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB). | 0.992 |
RC62_3540 | RC62_899 | RC62_3540 | RC62_899 | Flavodoxin. | ATP-cobalamin adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family. | 0.483 |
RC62_824 | RC62_899 | RC62_824 | RC62_899 | Methylmalonyl-CoA mutase. | ATP-cobalamin adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family. | 0.439 |
RC62_898 | RC62_899 | RC62_898 | RC62_899 | DUF2795 domain containing protein. | ATP-cobalamin adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family. | 0.534 |
RC62_899 | RC62_1743 | RC62_899 | RC62_1743 | ATP-cobalamin adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family. | Cobalamin-dependent methionine synthase I. | 0.495 |
RC62_899 | RC62_2164 | RC62_899 | RC62_2164 | ATP-cobalamin adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family. | Dialkylrecorsinol condensing enzyme DarA. | 0.483 |
RC62_899 | RC62_3175 | RC62_899 | RC62_3175 | ATP-cobalamin adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family. | ABC transporter related protein. | 0.510 |
RC62_899 | RC62_3179 | RC62_899 | RC62_3179 | ATP-cobalamin adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family. | Adenosylcobinamide kinase. | 0.930 |
RC62_899 | RC62_3540 | RC62_899 | RC62_3540 | ATP-cobalamin adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family. | Flavodoxin. | 0.483 |
RC62_899 | RC62_824 | RC62_899 | RC62_824 | ATP-cobalamin adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family. | Methylmalonyl-CoA mutase. | 0.439 |
RC62_899 | RC62_898 | RC62_899 | RC62_898 | ATP-cobalamin adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family. | DUF2795 domain containing protein. | 0.534 |
RC62_899 | cobS | RC62_899 | RC62_3181 | ATP-cobalamin adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family. | Cobalamin synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family. | 0.933 |
RC62_899 | cobT | RC62_899 | RC62_3180 | ATP-cobalamin adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family. | Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB). | 0.435 |
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