STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IW19_07250Methyltransferase type 11; Derived by automated computational analysis using gene prediction method: Protein Homology. (222 aa)    
Predicted Functional Partners:
IW19_07255
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.824
IW19_12805
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.679
IW19_12810
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.679
IW19_12815
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.679
IW19_07205
Glycine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GcvP family.
     
 0.628
IW19_17345
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
    
 0.603
IW19_07245
Metallopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.559
IW19_06130
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cytochrome P450 family.
    
  0.550
IW19_15555
Cytochrome P450; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cytochrome P450 family.
    
  0.550
IW19_12800
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.516
Your Current Organism:
Flavobacterium reichenbachii
NCBI taxonomy Id: 362418
Other names: CIP 109866, DSM 21791, F. reichenbachii, Flavobacterium reichenbachii Ali et al. 2009, Flavobacterium sp. WB 3.2-61, WB 3.2-61
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.