STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IW19_21995Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (369 aa)    
Predicted Functional Partners:
IW19_21990
Carbohydrate-binding family 9-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.952
IW19_21985
Glycosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.881
IW19_21980
Sodium:solute symporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
     0.834
IW19_03095
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.741
IW19_22000
Glycosylasparaginase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.647
IW19_21970
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.641
IW19_22020
Alpha-mannosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.609
IW19_08310
Thiamine biosynthesis protein ThiS; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.604
IW19_22005
beta-N-acetylhexosaminidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.604
IW19_17690
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.574
Your Current Organism:
Flavobacterium reichenbachii
NCBI taxonomy Id: 362418
Other names: CIP 109866, DSM 21791, F. reichenbachii, Flavobacterium reichenbachii Ali et al. 2009, Flavobacterium sp. WB 3.2-61, WB 3.2-61
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.