STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALD65936.1Hypothetical protein. (453 aa)    
Predicted Functional Partners:
ALD65937.1
Hypothetical protein.
       0.658
ung
uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.
       0.658
ALD65939.1
Hypothetical protein.
       0.640
rplI
50S ribosomal protein L9; Binds to the 23S rRNA.
       0.592
dnaC
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
       0.592
cysS
cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.586
rlmB
23S rRNA (guanosine2251-2'-O)-methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.
       0.586
ALD65942.1
Hypothetical protein.
       0.544
rpmG
50s ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.
       0.485
secE
Preprotein translocase subunit SecE; Belongs to the SecE/SEC61-gamma family.
       0.485
Your Current Organism:
Spiroplasma cantharicola
NCBI taxonomy Id: 362837
Other names: ATCC 43207, S. cantharicola, strain CC-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.