STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALD66561.1ABC transporter ATP-binding protein. (307 aa)    
Predicted Functional Partners:
scpA
Segregation and condensation protein A; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
  
 
 0.818
ALD66562.1
Hypothetical protein.
       0.797
ALD66120.1
Hypothetical protein.
 
  
 0.796
ALD66674.1
ABC transporter ATP-binding protein.
 
    0.793
ALD66560.1
Hypothetical protein.
       0.695
ALD66585.1
Hypothetical protein.
 
     0.591
recA
Recombinase A; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
  
 
 0.575
gyrB
DNA gyrase subunit B.
  
 
 0.569
parE
DNA topoisomerase IV subunit B.
  
 
 0.569
ALD66577.1
Hypothetical protein.
  
 
 0.569
Your Current Organism:
Spiroplasma cantharicola
NCBI taxonomy Id: 362837
Other names: ATCC 43207, S. cantharicola, strain CC-1
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